species:   Clros
pid:       PID2243
parent:    cro-mir-39
paralog:   
locus:     CADEHS020000138.2:12424-12490
matures:   ['GCGGGCGGGCGGGCGGCA', 'CCACCCUCCAGGCUGCU']
srr:       ERR5960091
genome:    /Users/jax/+Genomes/Fungal_genomes/Clros.GCA_902827195.2_C_rosea_IK726_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5960091.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5960091.cram CADEHS020000138.2:12424-12490

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

******************                             ******************* 
GCGGGCGGGCGGGCGGCAGGCCUCAGUCCUGUCUCAUGGAGGGUAGGUGCCACCCUCCAGGCUGCUU
((((.(.((.(((.(((..(((((..(((........)))..).))))))).))).)).).))))..
GCGGGCGGGCGGGCGGCA------------------------------------------------- l=18 a=1 c
-------------------------------------------------CCACCCUCCAGGCUGCU- l=17 a=0 c*
GCGGGCGGGCGGGCGGCA------------------------------------------------- l=18 a=1 ma
-------------------------------------------------CCACCCUCCAGGCUGCU- l=17 a=0 ma*

GCGGGCGGGCGGGCGGCA------------------------------------------------- l=18 a=1 (c,ma)

mb-01011
ax-1011101
ku-01
ss-100011111110
fn-011
